STRINGSTRING
XP_008438724.1 protein (Cucumis melo) - STRING interaction network
"XP_008438724.1" - TVP38/TMEM64 family membrane protein slr0305 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438724.1TVP38/TMEM64 family membrane protein slr0305; Transmembrane protein 41 homolog (267 aa)    
Predicted Functional Partners:
XP_008456989.1
TBC1 domain family member 15; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (655 aa)
           
  0.727
XP_008461084.1
Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic isoform X1 (403 aa)
           
  0.718
XP_008447732.1
Probable tetraacyldisaccharide 4’-kinase, mitochondrial (399 aa)
           
  0.614
XP_008456392.1
Probable lipid-A-disaccharide synthase, mitochondrial isoform X1 (473 aa)
           
  0.589
XP_008439954.1
Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial isoform X1 (291 aa)
           
  0.589
XP_008450839.1
Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (334 aa)
           
  0.561
XP_008458316.1
5-oxoprolinase (1265 aa)
     
   
  0.515
XP_008462526.1
Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial isoform X1 (443 aa)
           
  0.487
XP_008452401.1
Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (327 aa)
           
  0.485
XP_008442273.1
Cationic amino acid transporter 3, mitochondrial-like (670 aa)
         
  0.435
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (5%) [HD]