STRINGSTRING
XP_008438740.1 protein (Cucumis melo) - STRING interaction network
"XP_008438740.1" - Protein FAR1-RELATED SEQUENCE 7-like in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438740.1Protein FAR1-RELATED SEQUENCE 7-like (786 aa)    
Predicted Functional Partners:
XP_008456410.1
AT-hook motif nuclear-localized protein 14 isoform X1; Putative DNA-binding protein ESCAROLA isoform X1 (364 aa)
           
  0.718
XP_008458633.1
AT-hook motif nuclear-localized protein 2-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (223 aa)
           
  0.624
XP_008458256.1
AT-hook motif nuclear-localized protein 9-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns (334 aa)
           
  0.624
XP_008459769.1
Uncharacterized protein At1g04910 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (640 aa)
           
  0.578
XP_008442477.1
Uncharacterized protein At1g04910-like isoform X1 (630 aa)
           
  0.578
XP_008466327.1
Flowering-promoting factor 1-like protein 2 (129 aa)
           
  0.422
XP_008455643.1
Dentin sialophosphoprotein isoform X1 (565 aa)
           
  0.422
XP_008445094.1
Flowering-promoting factor 1-like (111 aa)
           
  0.422
XP_008437565.1
Uncharacterized protein LOC103482941; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (681 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (10%) [HD]