STRINGSTRING
XP_008438764.1 protein (Cucumis melo) - STRING interaction network
"XP_008438764.1" - Uncharacterized protein At4g15545-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438764.1Uncharacterized protein At4g15545-like (342 aa)    
Predicted Functional Partners:
XP_008462956.1
ACT domain-containing protein ACR11; Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic (292 aa)
     
   
  0.788
XP_008462692.1
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 (1083 aa)
     
        0.599
XP_008444540.1
LIM domain-containing protein WLIM1; Pollen-specific protein SF3 (198 aa)
           
  0.595
XP_008466435.1
ACT domain-containing protein ACR2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (469 aa)
           
  0.589
XP_008456171.1
Methylthioribose kinase (418 aa)
           
  0.586
XP_008457304.1
28S ribosomal protein S29, mitochondrial (454 aa)
           
  0.553
XP_008446832.1
ACT domain-containing protein ACR10-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (412 aa)
           
  0.483
XP_008442721.1
Uncharacterized protein LOC103486511 isoform X1 (411 aa)
           
  0.483
XP_008466126.1
Phosphoglycerate mutase-like protein 1; Probable phosphatase SPBPB21E7.02c (278 aa)
           
  0.481
XP_008466115.1
Phosphoglycerate mutase-like protein 1; Probable phosphatase SPBPB21E7.02c isoform X1 (347 aa)
           
  0.481
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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