STRINGSTRING
XP_008438765.1 protein (Cucumis melo) - STRING interaction network
"XP_008438765.1" - Prolyl 4-hydroxylase subunit alpha-1-like in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438765.1Prolyl 4-hydroxylase subunit alpha-1-like (303 aa)    
Predicted Functional Partners:
XP_008465221.1
phytanoyl-CoA dioxygenase isoform X1 (282 aa)
           
  0.728
XP_008455688.1
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family (276 aa)
     
 
  0.661
XP_008459446.1
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate (545 aa)
         
  0.660
XP_008454439.1
Proline iminopeptidase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (394 aa)
         
    0.650
XP_008462692.1
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 (1083 aa)
     
        0.641
XP_008437552.1
Probable aldehyde dehydrogenase isoform X1 (555 aa)
           
  0.621
XP_008461371.1
Endoglucanase 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns; Belongs to the glycosyl hydrolase 9 (cellulase E) family (619 aa)
           
  0.590
XP_008460200.1
Endoglucanase 13-like (492 aa)
           
  0.588
XP_008460452.1
4-coumarate--CoA ligase-like 6 (554 aa)
           
  0.485
glu2
Putative endo-1,3(4)-beta-glucanase 2 (701 aa)
           
  0.448
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (6%) [HD]