STRINGSTRING
XP_008438768.1 protein (Cucumis melo) - STRING interaction network
"XP_008438768.1" - Transcription factor MYB86-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438768.1Transcription factor MYB86-like (378 aa)    
Predicted Functional Partners:
XP_008466807.1
Splicing factor 3A subunit 3 (508 aa)
     
 
  0.647
XP_008458131.1
LOW QUALITY PROTEIN- scarecrow-like protein 6; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon; Belongs to the GRAS family (754 aa)
       
 
  0.456
XP_008448862.1
Scarecrow-like protein 6; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 mRNAs, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments; Belongs to the GRAS family (777 aa)
       
 
  0.456
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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