STRINGSTRING
XP_008438789.1 protein (Cucumis melo) - STRING interaction network
"XP_008438789.1" - Vesicle-associated protein 2-2-like in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438789.1Vesicle-associated protein 2-2-like (340 aa)    
Predicted Functional Partners:
XP_008465816.1
Oxysterol-binding protein-related protein 1C; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (828 aa)
       
 
  0.596
XP_008457468.1
Oxysterol-binding protein-related protein 3C; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns; Belongs to the OSBP family (459 aa)
       
 
  0.596
XP_008448873.1
Oxysterol-binding protein-related protein 2A isoform X1 (754 aa)
       
 
  0.596
XP_008446121.1
Oxysterol-binding protein-related protein 1D isoform X1 (810 aa)
       
 
  0.596
XP_008437116.1
Oxysterol-binding protein-related protein 2B-like (765 aa)
       
 
  0.596
XP_008439916.1
Vesicle-associated protein 4-2 (257 aa)
           
  0.581
XP_008457937.1
Phosphatidylinositol 4-kinase alpha 1; Belongs to the PI3/PI4-kinase family (2022 aa)
     
 
  0.493
XP_008447043.1
Phosphatidylinositol 4-kinase alpha 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns; Belongs to the PI3/PI4-kinase family (2037 aa)
     
 
  0.493
XP_008442389.1
Transcription factor bHLH140 (747 aa)
     
   
  0.487
XP_008462375.1
Anoctamin-like protein At1g73020 (661 aa)
     
   
  0.483
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (5%) [HD]