STRINGSTRING
XP_008438820.1 protein (Cucumis melo) - STRING interaction network
"XP_008438820.1" - Serine/threonine-protein kinase CDL1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438820.1Serine/threonine-protein kinase CDL1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (513 aa)    
Predicted Functional Partners:
XP_008446511.1
Flavin-containing monooxygenase FMO GS-OX-like 9 (493 aa)
           
  0.627
YUC4
LOW QUALITY PROTEIN- probable indole-3-pyruvate monooxygenase YUCCA4; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (422 aa)
           
  0.627
XP_008439299.1
Protein SGT1 homolog (357 aa)
       
 
  0.617
XP_008455940.1
Transcription factor VOZ1-like (467 aa)
           
  0.612
XP_008439796.1
Transcription factor VOZ1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (483 aa)
           
  0.612
XP_008466706.1
lysM domain-containing GPI-anchored protein 1 (432 aa)
           
  0.608
XP_008464888.1
Probable flavin-containing monooxygenase 1 (511 aa)
           
  0.571
XP_008450967.1
Probable flavin-containing monooxygenase 1 (518 aa)
           
  0.571
YUC6
Indole-3-pyruvate monooxygenase YUCCA6 (434 aa)
           
  0.571
XP_008462739.1
Rac-like GTP-binding protein ARAC7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns; Belongs to the small GTPase superfamily. Rho family (210 aa)
       
 
  0.481
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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