STRINGSTRING
XP_008438828.1 protein (Cucumis melo) - STRING interaction network
"XP_008438828.1" - Zinc finger CCCH domain-containing protein 34 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438828.1Zinc finger CCCH domain-containing protein 34 (481 aa)    
Predicted Functional Partners:
XP_008455508.1
Fimbrin-5; Fimbrin-like protein 2 (690 aa)
     
   
  0.630
XP_008449094.1
Fimbrin-1-like (687 aa)
     
   
  0.630
XP_008438722.1
Probable E3 ubiquitin-protein ligase LUL4 (400 aa)
           
  0.623
XP_008442675.1
Probable E3 ubiquitin-protein ligase LOG2 (368 aa)
           
  0.607
XP_008450523.1
Pyrrolidone-carboxylate peptidase 1; Uncharacterized protein LOC103492104 (220 aa)
           
  0.560
XP_008438061.1
DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family (492 aa)
     
 
  0.442
XP_008443510.1
Uncharacterized protein LOC103487079 (188 aa)
       
 
  0.422
XP_008437787.1
CCR4-NOT transcription complex subunit 1 (2381 aa)
       
 
  0.422
XP_008441380.1
E3 ubiquitin-protein ligase SDIR1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (275 aa)
           
  0.420
XP_008465049.1
Desumoylating isopeptidase 1-like isoform X1 (293 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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