STRINGSTRING
XP_008438837.1 protein (Cucumis melo) - STRING interaction network
"XP_008438837.1" - Protein NBR1 homolog in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438837.1Protein NBR1 homolog; Uncharacterized protein LOC103483818 (780 aa)    
Predicted Functional Partners:
XP_008439746.1
Ubiquitin-like modifier-activating enzyme atg7 (707 aa)
       
 
  0.982
XP_008456193.1
Autophagy protein 5; Required for autophagy (349 aa)
       
 
  0.972
XP_008460450.1
E3 ubiquitin-protein ligase CHIP (274 aa)
       
 
  0.970
XP_008451640.1
LOW QUALITY PROTEIN- protein SPIRRIG; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons (3554 aa)
     
 
  0.966
XP_008459833.1
Beclin-1-like protein isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (509 aa)
           
  0.963
XP_008461385.1
Autophagy-related protein 8i-like; Belongs to the ATG8 family (118 aa)
     
 
  0.950
XP_008458134.1
Autophagy-related protein 8f; Belongs to the ATG8 family (117 aa)
     
 
  0.950
XP_008455886.1
Autophagy-related protein 8c; Belongs to the ATG8 family (119 aa)
     
 
  0.950
XP_008449170.1
Autophagy-related protein 8e-like (102 aa)
     
 
  0.950
XP_008441000.1
Autophagy-related protein 8C; Belongs to the ATG8 family (118 aa)
     
 
  0.950
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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