STRINGSTRING
XP_008438872.1 protein (Cucumis melo) - STRING interaction network
"XP_008438872.1" - Protein ALWAYS EARLY 3 isoform X1 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438872.1Protein ALWAYS EARLY 3 isoform X1 (1138 aa)    
Predicted Functional Partners:
XP_008446982.1
Retinoblastoma-related protein isoform X1 (1025 aa)
     
 
  0.917
XP_008450857.1
WD-40 repeat-containing protein MSI4 (518 aa)
     
 
  0.859
XP_008447958.1
WD-40 repeat-containing protein MSI2-like (393 aa)
     
 
  0.859
XP_008438246.1
WD-40 repeat-containing protein MSI1 (423 aa)
     
 
  0.859
XP_008448998.1
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (707 aa)
     
        0.842
XP_008462730.1
Protein tesmin/TSO1-like CXC 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (602 aa)
     
 
  0.807
XP_008458475.1
Protein tesmin/TSO1-like CXC 5 isoform X1 (590 aa)
     
 
  0.807
XP_008454271.1
Protein tesmin/TSO1-like CXC 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (255 aa)
     
 
  0.807
XP_008449927.1
CRC domain-containing protein TSO1 (586 aa)
     
 
  0.807
XP_008438631.1
Protein tesmin/TSO1-like CXC 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (788 aa)
     
 
  0.807
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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