STRINGSTRING
XP_008438909.1 protein (Cucumis melo) - STRING interaction network
"XP_008438909.1" - Exopolygalacturonase-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438909.1Exopolygalacturonase-like (424 aa)    
Predicted Functional Partners:
XP_008443206.1
alpha-L-arabinofuranosidase 1-like (678 aa)
         
  0.719
XP_008443532.1
Polygalacturonase At1g48100; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (477 aa)
   
   
0.686
XP_008465729.1
Polygalacturonase-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (392 aa)
   
   
0.682
XP_008460449.1
Polygalacturonase-like (284 aa)
   
   
0.679
XP_008444050.1
Polygalacturonase-like; Belongs to the glycosyl hydrolase 28 family (283 aa)
   
   
0.679
XP_008443656.1
Polygalacturonase (404 aa)
   
   
0.677
XP_008460791.1
Polygalacturonase-like (390 aa)
   
   
0.676
MPG2
Polygalacturonase-like precursor; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- added 759 bases not found in genome assembly (423 aa)
   
   
0.669
XP_008448091.1
Polygalacturonase-like (401 aa)
   
   
0.669
XP_008460550.1
Polygalacturonase-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 22 Proteins (392 aa)
   
   
0.668
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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