STRINGSTRING
XP_008438918.1 protein (Cucumis melo) - STRING interaction network
"XP_008438918.1" - Two-component response regulator in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438918.1Two-component response regulator; Transcriptional activator that binds specific DNA sequence (660 aa)    
Predicted Functional Partners:
XP_008454224.1
Histidine-containing phosphotransfer protein 6 (186 aa)
       
  0.712
XP_008458510.1
Histidine-containing phosphotransfer protein 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 11 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (154 aa)
       
  0.686
XP_008438771.1
Histidine-containing phosphotransfer protein 1-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (154 aa)
       
  0.686
XP_008462426.1
Histidine-containing phosphotransfer protein 4; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (150 aa)
       
  0.686
XP_008447553.1
Histidine-containing phosphotransfer protein 4-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (150 aa)
       
  0.686
XP_008450710.1
Histidine-containing phosphotransfer protein 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (151 aa)
       
  0.666
XP_008445576.1
Histidine-containing phosphotransfer protein 4-like (132 aa)
       
  0.653
XP_008447440.1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (890 aa)
     
   
  0.624
XP_008438973.1
Transcription factor MYB108 (310 aa)
       
 
  0.623
XP_008458776.1
Pseudo histidine-containing phosphotransfer protein 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (165 aa)
       
    0.613
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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