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XP_008438919.1 protein (Cucumis melo) - STRING interaction network
"XP_008438919.1" - COBRA-like protein 7 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438919.1COBRA-like protein 7 (654 aa)    
Predicted Functional Partners:
XP_008466633.1
Exocyst complex component SEC3A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns (883 aa)
           
  0.583
XP_008440617.1
Type I inositol polyphosphate 5-phosphatase 5-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (571 aa)
           
  0.483
XP_008441968.1
Apyrase 2-like; Belongs to the GDA1/CD39 NTPase family (466 aa)
           
  0.481
XP_008460515.1
Putative transcription factor bHLH086 (282 aa)
     
   
  0.428
XP_008437487.1
Probable methyltransferase PMT18; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (636 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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