STRINGSTRING
XP_008438921.1 protein (Cucumis melo) - STRING interaction network
"XP_008438921.1" - Extensin-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438921.1Extensin-like (177 aa)    
Predicted Functional Partners:
XP_008467156.1
Extensin-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (140 aa)
           
  0.836
XP_008450945.1
Uncharacterized protein LOC103492382; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns (189 aa)
           
  0.628
XP_008460141.1
UTP-RNA uridylyltransferase 1; Uncharacterized protein LOC103499041 (751 aa)
           
  0.627
XP_008445322.1
Uncharacterized protein LOC103488388 (425 aa)
           
  0.567
XP_008439763.1
GDSL esterase/lipase At1g28570-like; Belongs to the ’GDSL’ lipolytic enzyme family (398 aa)
           
  0.485
XP_008439761.1
GDSL esterase/lipase At1g28570-like; Belongs to the ’GDSL’ lipolytic enzyme family (384 aa)
           
  0.485
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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