STRINGSTRING
XP_008438925.1 protein (Cucumis melo) - STRING interaction network
"XP_008438925.1" - LOW QUALITY PROTEIN: transcription factor MYB12 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438925.1LOW QUALITY PROTEIN- transcription factor MYB12; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (303 aa)    
Predicted Functional Partners:
XP_008449553.1
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (881 aa)
           
  0.701
XP_008444582.1
Peamaclein-like (85 aa)
           
  0.607
XP_008448851.1
Aspartic proteinase nepenthesin-1; Belongs to the peptidase A1 family (481 aa)
           
  0.605
XP_008463530.1
Chalcone-flavonone isomerase family protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns; Belongs to the chalcone isomerase family (243 aa)
           
  0.590
XP_008452207.1
snRNA-activating protein complex subunit 4 (798 aa)
           
  0.586
XP_008459735.1
Naringenin,2-oxoglutarate 3-dioxygenase-like; Belongs to the iron/ascorbate-dependent oxidoreductase family (317 aa)
     
 
  0.575
XP_008449161.1
Naringenin,2-oxoglutarate 3-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family (368 aa)
     
 
  0.575
XP_008455615.1
Protein TRANSPARENT TESTA GLABRA 1 (333 aa)
       
 
  0.477
XP_008466392.1
Transcription factor HY5 (157 aa)
       
 
  0.454
bZIP2
Uncharacterized protein LOC103488299; Transcription factor HY5-like (158 aa)
       
 
  0.454
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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