STRINGSTRING
XP_008438929.1 protein (Cucumis melo) - STRING interaction network
"XP_008438929.1" - Protein argonaute 1 in Cucumis melo
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438929.1Protein argonaute 1; Belongs to the argonaute family (1059 aa)    
Predicted Functional Partners:
XP_008437750.1
Endoribonuclease Dicer homolog 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns; Belongs to the helicase family. Dicer subfamily (1990 aa)
     
 
  0.983
XP_008443887.1
Dicer-like protein 4 isoform X1; Belongs to the helicase family. Dicer subfamily (1653 aa)
     
 
  0.982
XP_008443670.1
Endoribonuclease Dicer homolog 2 isoform X1; Belongs to the helicase family. Dicer subfamily (1393 aa)
     
 
  0.979
XP_008445598.1
Endoribonuclease Dicer homolog 3; Belongs to the helicase family. Dicer subfamily (1645 aa)
     
 
  0.972
XP_008444916.1
Double-stranded RNA-binding protein 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (347 aa)
       
 
  0.969
XP_008452556.1
Protein DCL, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (225 aa)
           
  0.967
XP_008460847.1
Protein SUPPRESSOR OF GENE SILENCING 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (650 aa)
     
   
  0.961
XP_008445459.1
Small RNA 2’-O-methyltransferase isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (948 aa)
           
  0.949
XP_008453109.1
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1117 aa)
     
   
  0.884
XP_008464954.1
Double-stranded RNA-binding protein 1 isoform X1 (447 aa)
       
 
  0.871
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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