STRINGSTRING
XP_008438938.1 protein (Cucumis melo) - STRING interaction network
"XP_008438938.1" - acetate/butyrate--CoA ligase AAE7, peroxisomal in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438938.1acetate/butyrate--CoA ligase AAE7, peroxisomal; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (567 aa)    
Predicted Functional Partners:
XP_008444688.1
Peroxisomal membrane protein 11A (247 aa)
     
 
  0.674
XP_008443161.1
14 kDa zinc-binding protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 21 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (156 aa)
           
  0.615
XP_008455616.1
ABC transporter D family member 1 (1326 aa)
     
   
  0.608
XP_008459729.1
Stress-response A/B barrel domain-containing protein UP3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (257 aa)
           
  0.561
XP_008452222.1
Uncharacterized protein LOC103493304 (466 aa)
     
   
  0.552
XP_008460338.1
GDSL esterase/lipase 5; Belongs to the ’GDSL’ lipolytic enzyme family (372 aa)
           
  0.520
XP_008442220.1
Aspartic proteinase nepenthesin-1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns; Belongs to the peptidase A1 family (461 aa)
           
  0.497
XP_008455845.1
Isocitrate lyase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns; Belongs to the isocitrate lyase/PEP mutase superfamily. Isocitrate lyase family (576 aa)
     
   
  0.491
XP_008438907.1
Probable acyl-CoA dehydrogenase IBR3 isoform X1; acyl-CoA dehydrogenase family member 10 (830 aa)
   
   
  0.433
XP_008443757.1
Pentatricopeptide repeat-containing protein At1g05670, mitochondrial (748 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (9%) [HD]