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XP_008438942.1 protein (Cucumis melo) - STRING interaction network
"XP_008438942.1" - DNA-directed RNA polymerase subunit in Cucumis melo
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
XP_008438942.1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (114 aa)    
Predicted Functional Partners:
XP_008441761.1
LOW QUALITY PROTEIN- DNA-directed RNA polymerases II, IV and V subunit 3-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (320 aa)
     
 
  0.994
XP_008456781.1
Transcription elongation factor S-II (369 aa)
       
 
  0.993
XP_008461561.1
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (116 aa)
     
 
  0.989
XP_008447327.1
LOW QUALITY PROTEIN- transcription initiation factor IIF subunit alpha; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (462 aa)
     
 
  0.987
XP_008461807.1
DNA-directed RNA polymerases II, IV and V subunit 11; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (116 aa)
   
 
  0.986
XP_008461312.1
DNA-directed RNA polymerases II, IV and V subunit 11-like (116 aa)
   
 
  0.986
XP_008448918.1
RNA polymerase II transcription factor B subunit 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (70 aa)
     
 
  0.975
XP_008446194.1
DNA-directed RNA polymerase subunit 10-like protein (71 aa)
   
 
  0.967
XP_008456558.1
DNA-directed RNA polymerases I, II, and III subunit RPABC5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 26 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns (71 aa)
   
 
  0.967
XP_008441083.1
RNA polymerase II transcription factor B subunit 2; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (434 aa)
     
 
  0.965
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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