STRINGSTRING
XP_008438945.1 protein (Cucumis melo) - STRING interaction network
"XP_008438945.1" - Ubiquitin-conjugating enzyme E2 32 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
XP_008438945.1Ubiquitin-conjugating enzyme E2 32; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns; Belongs to the ubiquitin-conjugating enzyme family (297 aa)    
Predicted Functional Partners:
XP_008443923.1
Protein OS-9 isoform X1 (294 aa)
     
 
  0.942
XP_008457496.1
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family (167 aa)
     
 
0.842
XP_008460359.1
Ubiquitin-conjugating enzyme E2 34-like; Belongs to the ubiquitin-conjugating enzyme family (237 aa)
     
0.837
XP_008455400.1
E3 ubiquitin-protein ligase synoviolin-like (558 aa)
     
 
  0.809
XP_008449651.1
E3 ubiquitin-protein ligase KEG-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (1621 aa)
       
 
  0.802
XP_008446971.1
E3 ubiquitin-protein ligase KEG; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (1629 aa)
       
 
  0.802
XP_008464831.1
ERAD-associated E3 ubiquitin-protein ligase component HRD3A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (683 aa)
     
 
  0.731
XP_008464378.1
Ubiquitin-conjugating enzyme E2 27; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns; Belongs to the ubiquitin-conjugating enzyme family (194 aa)
     
   
  0.723
XP_008448966.1
Peroxisome biogenesis protein 5 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (743 aa)
       
 
  0.713
XP_008452114.1
Probable ubiquitin-conjugating enzyme E2 16; Belongs to the ubiquitin-conjugating enzyme family (161 aa)
           
  0.691
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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