STRINGSTRING
XP_008438960.1 protein (Cucumis melo) - STRING interaction network
"XP_008438960.1" - Phytochrome in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438960.1Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1132 aa)    
Predicted Functional Partners:
Cry1
Cryptochrome-1 isoform X1 (681 aa)
       
 
  0.981
XP_008453043.1
Transcription factor PIF3 isoform X1 (706 aa)
       
  0.944
XP_008462380.1
Protein EARLY FLOWERING 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (694 aa)
       
  0.917
XP_008444497.1
Protein EARLY FLOWERING 3 (717 aa)
       
  0.917
Cry2
Cryptochrome-1 (633 aa)
       
 
  0.866
XP_008447246.1
Two-component response regulator-like APRR7 (791 aa)
       
 
  0.752
XP_008460951.1
Uncharacterized protein LOC103499684 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (786 aa)
       
 
  0.741
XP_008447345.1
Transcription factor PIF1-like isoform X1 (518 aa)
       
 
  0.734
XP_008450371.1
Phytochromobilin-ferredoxin oxidoreductase, chloroplastic (322 aa)
           
  0.732
XP_008459822.1
Protein LHY-like isoform X1 (736 aa)
           
  0.721
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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