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XP_008438974.1 protein (Cucumis melo) - STRING interaction network
"XP_008438974.1" - 30S ribosomal protein S1, chloroplastic in Cucumis melo
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438974.130S ribosomal protein S1, chloroplastic (413 aa)    
Predicted Functional Partners:
XP_008455431.1
50S ribosomal protein L6, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL6 family (233 aa)
   
 
  0.988
XP_008463697.1
30S ribosomal protein S20, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (184 aa)
     
 
  0.986
XP_008461258.1
30S ribosomal protein 2, chloroplastic (251 aa)
     
 
  0.983
XP_008446604.1
50S ribosomal protein L15, chloroplastic; Belongs to the universal ribosomal protein uL15 family (268 aa)
   
 
  0.982
XP_008441337.1
50S ribosomal protein L27, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (183 aa)
   
 
  0.982
XP_008439845.1
30S ribosomal protein S5, chloroplastic; Belongs to the universal ribosomal protein uS5 family (307 aa)
   
 
  0.979
XP_008461583.1
30S ribosomal protein 3, chloroplastic-like (192 aa)
   
 
  0.979
XP_008466625.1
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family (204 aa)
     
 
  0.979
XP_008463369.1
50S ribosomal protein L9, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (198 aa)
     
 
  0.979
XP_008462962.1
30S ribosomal protein S10, chloroplastic (269 aa)
   
 
  0.978
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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