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XP_008438999.1 protein (Cucumis melo) - STRING interaction network
"XP_008438999.1" - 50S ribosomal protein L3-2, chloroplastic in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438999.150S ribosomal protein L3-2, chloroplastic; Belongs to the universal ribosomal protein uL3 family (328 aa)    
Predicted Functional Partners:
XP_008463780.1
50S ribosomal protein L13, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL13 family (248 aa)
 
 
  0.991
XP_008440163.1
50S ribosomal protein L13, chloroplastic (204 aa)
 
 
  0.991
XP_008440040.1
39S ribosomal protein L4, mitochondrial (331 aa)
 
 
  0.990
XP_008437516.1
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family (405 aa)
 
 
  0.989
XP_008454200.1
Uncharacterized protein LOC103494679 (448 aa)
     
 
  0.989
XP_008466625.1
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family (204 aa)
 
 
  0.989
XP_008464840.1
50S ribosomal protein L21, mitochondrial (279 aa)
     
 
  0.988
XP_008441337.1
50S ribosomal protein L27, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (183 aa)
     
 
  0.988
XP_008455431.1
50S ribosomal protein L6, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL6 family (233 aa)
   
 
  0.988
XP_008440709.1
60S ribosomal protein L6, mitochondrial; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments; Belongs to the universal ribosomal protein uL6 family (102 aa)
   
 
  0.988
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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