STRINGSTRING
XP_008439035.1 protein (Cucumis melo) - STRING interaction network
"XP_008439035.1" - Auxin-responsive protein SAUR36-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439035.1Auxin-responsive protein SAUR36-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (169 aa)    
Predicted Functional Partners:
XP_008458302.1
Multiprotein-bridging factor 1c (212 aa)
           
  0.628
XP_008442759.1
Protein DMR6-LIKE OXYGENASE 1; 2’-deoxymugineic-acid 2’-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family (374 aa)
           
  0.628
XP_008441059.1
SAL1 phosphatase-like (396 aa)
           
  0.564
XP_008466501.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (949 aa)
           
  0.517
XP_008465418.1
Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (309 aa)
           
  0.517
XP_008460034.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1110 aa)
           
  0.517
XP_008444602.1
E3 ubiquitin-protein ligase RLIM-like (713 aa)
           
  0.517
XP_008441903.1
LETM1 and EF-hand domain-containing protein 1, mitochondrial; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (760 aa)
           
  0.517
XP_008448819.1
Transcription factor MYB1R1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 21 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (334 aa)
           
  0.422
XP_008463216.1
Transcription factor DIVARICATA (295 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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