STRINGSTRING
XP_008439060.1 protein (Cucumis melo) - STRING interaction network
"XP_008439060.1" - Transcription factor bHLH62-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439060.1Transcription factor bHLH62-like (540 aa)    
Predicted Functional Partners:
XP_008465931.1
Two-component response regulator-like APRR2 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (528 aa)
       
 
  0.587
XP_008448736.1
Two-component response regulator-like APRR2 isoform X1 (559 aa)
       
 
  0.587
XP_008459338.1
Myb-related protein 306-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (398 aa)
           
  0.586
XP_008456284.1
Myb family transcription factor APL-like (362 aa)
           
  0.586
XP_008447069.1
Myb family transcription factor APL-like isoform X1 (379 aa)
           
  0.586
XP_008443377.1
Transcription factor MYB76-like isoform X1 (234 aa)
           
  0.586
XP_008460218.1
Transcription factor bHLH111; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns (448 aa)
           
  0.553
XP_008443465.1
Protein NRT1/ PTR FAMILY 5.8-like (560 aa)
           
  0.550
XP_008462238.1
Crooked neck-like protein 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (703 aa)
           
  0.549
XP_008457385.1
Cytochrome P450 86A1 (514 aa)
           
  0.549
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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