STRINGSTRING
XP_008439119.1 protein (Cucumis melo) - STRING interaction network
"XP_008439119.1" - Probable aminotransferase ACS12 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439119.1Probable aminotransferase ACS12 (510 aa)    
Predicted Functional Partners:
XP_008449369.1
ETO1-like protein 1 isoform X1 (890 aa)
       
 
  0.652
XP_008448309.1
Switch 2 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (878 aa)
       
 
  0.608
XP_008447405.1
Protein CHROMATIN REMODELING 8 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (1223 aa)
       
 
  0.606
XP_008459274.1
1-aminocyclopropane-1-carboxylate oxidase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family (300 aa)
     
   
  0.606
ETR2
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (767 aa)
     
   
  0.598
XP_008459583.1
Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (918 aa)
   
 
  0.453
CmEIL2
ETHYLENE INSENSITIVE 3-like 1 protein (615 aa)
           
  0.435
CmEIL1
Protein ETHYLENE INSENSITIVE 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 28 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (625 aa)
           
  0.435
XP_008459328.1
expansin-A5-like (243 aa)
           
  0.422
XP_008443790.1
expansin-A10; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 43 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (252 aa)
           
  0.422
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (8%) [HD]