STRINGSTRING
XP_008439143.1 protein (Cucumis melo) - STRING interaction network
"XP_008439143.1" - PTI1-like tyrosine-protein kinase At3g15890 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439143.1PTI1-like tyrosine-protein kinase At3g15890; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (364 aa)    
Predicted Functional Partners:
XP_008440574.1
Serine/threonine-protein kinase SAPK2; Belongs to the protein kinase superfamily (344 aa)
   
 
      0.420
XP_008449831.1
Serine/threonine-protein kinase SRK2H-like; Belongs to the protein kinase superfamily (355 aa)
   
 
      0.410
XP_008442071.1
Serine/threonine-protein kinase SAPK2-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon (456 aa)
   
 
      0.407
XP_008442077.1
Serine/threonine-protein kinase SRK2H-like; Belongs to the protein kinase superfamily (357 aa)
   
 
      0.402
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (7%) [HD]