STRINGSTRING
XP_008439145.1 protein (Cucumis melo) - STRING interaction network
"XP_008439145.1" - MADS-box transcription factor 17-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439145.1MADS-box transcription factor 17-like (236 aa)    
Predicted Functional Partners:
XP_008462070.1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1119 aa)
           
  0.627
XP_008438960.1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1132 aa)
           
  0.627
XP_008445143.1
LOW QUALITY PROTEIN- transcriptional corepressor LEUNIG; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (899 aa)
       
 
  0.623
XP_008464361.1
Floricaula/leafy homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (385 aa)
       
 
  0.609
XP_008464788.1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1153 aa)
           
  0.569
XP_008464786.1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1217 aa)
           
  0.569
XP_008443902.1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1132 aa)
           
  0.563
XP_008450914.1
RNA polymerase-associated protein CTR9 homolog (1077 aa)
     
 
  0.499
XP_008456523.1
Protein FLOWERING LOCUS D isoform X2; Lysine-specific histone demethylase 1 homolog 3 (898 aa)
       
 
  0.492
XP_008463667.1
E3 SUMO-protein ligase SIZ1 (878 aa)
       
 
  0.456
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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