STRINGSTRING
XP_008439146.1 protein (Cucumis melo) - STRING interaction network
"XP_008439146.1" - Uncharacterized protein LOC103484029 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439146.1Uncharacterized protein LOC103484029 (271 aa)    
Predicted Functional Partners:
XP_008452064.1
Pheophytinase, chloroplastic isoform X1 (373 aa)
           
  0.949
XP_008457446.1
Tropinone reductase homolog At1g07440 (332 aa)
           
  0.853
XP_008461232.1
E3 ubiquitin-protein ligase RING1-like (332 aa)
           
  0.632
XP_008450834.1
Graves disease carrier protein homolog isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments; Belongs to the mitochondrial carrier (TC 2.A.29) family (341 aa)
           
  0.627
XP_008467033.1
MLO-like protein 1 (185 aa)
           
  0.609
XP_008460095.1
MLO-like protein; May be involved in modulation of pathogen defense and leaf cell death (514 aa)
           
  0.609
XP_008465196.1
calumenin-B-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (375 aa)
           
  0.589
XP_008445899.1
calumenin-B; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (358 aa)
           
  0.589
XP_008461826.1
Agamous-like MADS-box protein AGL15 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (251 aa)
           
  0.563
XP_008441929.1
LOW QUALITY PROTEIN- cysteine and histidine-rich domain-containing protein RAR1; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 2 bases in 1 codon (232 aa)
           
  0.563
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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