STRINGSTRING
XP_008439147.1 protein (Cucumis melo) - STRING interaction network
"XP_008439147.1" - Uncharacterized protein LOC103484030 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439147.1Uncharacterized protein LOC103484030; Probable serine/threonine-protein kinase dyrk2 (615 aa)    
Predicted Functional Partners:
XP_008459091.1
Aspartic proteinase nepenthesin-2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments; Belongs to the peptidase A1 family (526 aa)
           
  0.623
XP_008461887.1
F-box/kelch-repeat protein OR23; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (412 aa)
           
  0.622
XP_008461740.1
Protein DA1-related 2 (468 aa)
           
  0.622
XP_008456260.1
ABC transporter B family member 25, mitochondrial isoform X1 (762 aa)
           
  0.622
XP_008458619.1
Probable 2-carboxy-D-arabinitol-1-phosphatase; Uncharacterized protein LOC103497966 (514 aa)
           
  0.571
XP_008450781.1
Uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913; Uncharacterized protein LOC103492262 (526 aa)
           
  0.571
XP_008463710.1
Uncharacterized protein LOC103501794 isoform X1 (503 aa)
           
  0.564
XP_008457965.1
Sterol 3-beta-glucosyltransferase UGT80A2-like isoform X1 (583 aa)
           
  0.564
XP_008453366.1
Transcription factor DICHOTOMA-like (355 aa)
           
  0.564
XP_008451692.1
E3 ubiquitin-protein ligase Arkadia; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (543 aa)
           
  0.564
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (6%) [HD]