STRINGSTRING
XP_008439152.1 protein (Cucumis melo) - STRING interaction network
"XP_008439152.1" - Programmed cell death protein 4-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439152.1Programmed cell death protein 4-like (709 aa)    
Predicted Functional Partners:
XP_008462340.1
Eukaryotic initiation factor 4A-11; Belongs to the DEAD box helicase family (413 aa)
     
 
  0.916
XP_008448960.1
DEAD-box ATP-dependent RNA helicase 47, mitochondrial (555 aa)
     
 
  0.916
XP_008447621.1
Eukaryotic initiation factor 4A-8; Belongs to the DEAD box helicase family (413 aa)
     
 
  0.916
XP_008438702.1
DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 (473 aa)
     
 
  0.916
XP_008437284.1
LOW QUALITY PROTEIN- GMP synthase [glutamine-hydrolyzing]; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (534 aa)
     
        0.866
XP_008456982.1
Elongation factor 1-gamma-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 18 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (422 aa)
     
        0.860
XP_008452241.1
Elongation factor 1-gamma-like (410 aa)
     
        0.860
XP_008452240.1
Elongation factor 1-gamma-like (409 aa)
     
        0.860
XP_008445205.1
DEAD-box ATP-dependent RNA helicase 56 (427 aa)
     
 
  0.773
Cm-ERS1
Ethylene response sensor 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (665 aa)
       
 
  0.772
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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