STRINGSTRING
XP_008439154.1 protein (Cucumis melo) - STRING interaction network
"XP_008439154.1" - Transcription factor TCP19 in Cucumis melo
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second shell of interactors
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
XP_008439154.1Transcription factor TCP19 (346 aa)    
Predicted Functional Partners:
XP_008462976.1
FRIGIDA-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns; Belongs to the Frigida family (576 aa)
       
      0.791
XP_008453195.1
Transcription factor bHLH47; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (253 aa)
       
      0.791
XP_008445601.1
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (623 aa)
       
      0.791
XP_008439166.1
traB domain-containing protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (380 aa)
           
  0.723
XP_008463337.1
Transcription activator GLK1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (447 aa)
       
 
  0.695
XP_008457979.1
GATA zinc finger domain-containing protein 16 (532 aa)
       
 
  0.695
XP_008466973.1
Zinc finger protein 7-like (252 aa)
       
      0.688
XP_008456866.1
Zinc finger protein 4-like isoform X1 (281 aa)
       
      0.688
XP_008451912.1
Ankyrin-3-like isoform X1; Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like (173 aa)
       
      0.688
XP_008449147.1
Ribonuclease 3-like protein 2 isoform X1 (346 aa)
       
      0.688
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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