STRINGSTRING
XP_008439162.1 protein (Cucumis melo) - STRING interaction network
"XP_008439162.1" - Dehydration-responsive element-binding protein 1A in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439162.1Dehydration-responsive element-binding protein 1A (212 aa)    
Predicted Functional Partners:
XP_008437985.1
Desiccation protectant protein Lea14 homolog (201 aa)
           
  0.711
XP_008460645.1
Myb-related protein Myb4-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (284 aa)
           
  0.695
XP_008451250.1
Myb-related protein Myb4-like (254 aa)
           
  0.695
XP_008447428.1
Myb-related protein Myb4-like (246 aa)
           
  0.695
XP_008458820.1
NAC domain-containing protein 8 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (398 aa)
           
  0.627
XP_008441966.1
NAC domain-containing protein 100-like (330 aa)
           
  0.627
XP_008437221.1
Heat stress transcription factor B-2b; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (339 aa)
           
  0.624
XP_008438571.1
Ureidoglycolate hydrolase (474 aa)
           
  0.619
XP_008437046.1
E3 ubiquitin-protein ligase HOS1 (966 aa)
           
  0.598
XP_008450018.1
Transcription factor ICE1 (528 aa)
           
  0.597
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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