STRINGSTRING
XP_008439182.1 protein (Cucumis melo) - STRING interaction network
"XP_008439182.1" - Inactive rhomboid protein 1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439182.1Inactive rhomboid protein 1 (333 aa)    
Predicted Functional Partners:
XP_008452017.1
RHOMBOID-like protein 12, mitochondrial; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (336 aa)
           
  0.550
XP_008460959.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (528 aa)
   
   
  0.439
XP_008441639.1
Probable zinc metalloprotease EGY2, chloroplastic (474 aa)
   
   
  0.430
XP_008460036.1
RHOMBOID-like protein 13; Rhomboid protein 2 (271 aa)
           
  0.422
XP_008441963.1
Rhomboid-like protein 15 isoform X2; Uncharacterized protein At3g58460 (397 aa)
           
  0.420
XP_008465676.1
Rhomboid-like protein 19; Transmembrane protein 115 (308 aa)
           
  0.405
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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