STRINGSTRING
XP_008439194.1 protein (Cucumis melo) - STRING interaction network
"XP_008439194.1" - ADP-ribosylation factor-related protein 1 isoform X1 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439194.1ADP-ribosylation factor-related protein 1 isoform X1; Belongs to the small GTPase superfamily. Arf family (205 aa)    
Predicted Functional Partners:
XP_008462142.1
Protein SYS1 homolog (152 aa)
     
 
  0.868
XP_008443937.1
N-alpha-acetyltransferase 35, NatC auxiliary subunit isoform X1 (728 aa)
           
  0.727
XP_008465921.1
Ras-related protein RABH1b (208 aa)
     
 
  0.708
XP_008440593.1
Ras-related protein RABH1e (207 aa)
     
 
  0.708
XP_008451076.1
Protein ROOT PRIMORDIUM DEFECTIVE 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (398 aa)
           
  0.704
XP_008462297.1
exportin-T (990 aa)
           
  0.700
XP_008442510.1
Delta-1-pyrroline-5-carboxylate synthase-like (519 aa)
           
  0.682
XP_008441400.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (717 aa)
           
  0.682
XP_008459398.1
Probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 (581 aa)
     
   
  0.629
XP_008456934.1
tRNA (guanine(26)-N(2))-dimethyltransferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (440 aa)
     
   
  0.629
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (8%) [HD]