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XP_008439212.1 protein (Cucumis melo) - STRING interaction network
"XP_008439212.1" - DNA mismatch repair protein MSH3 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439212.1DNA mismatch repair protein MSH3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (1190 aa)    
Predicted Functional Partners:
XP_008449115.1
DNA mismatch repair protein MSH5 isoform X1 (824 aa)
   
 
0.963
XP_008453367.1
DNA mismatch repair protein MSH2 isoform X1; Component of the post-replicative DNA mismatch repair system (MMR) (942 aa)
   
 
0.961
XP_008463072.1
DNA mismatch repair protein MLH1 isoform X1 (737 aa)
 
 
  0.950
XP_008464069.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (266 aa)
     
 
  0.931
XP_008463200.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (351 aa)
     
 
  0.931
XP_008465670.1
DNA polymerase epsilon catalytic subunit A-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (138 aa)
     
 
  0.925
XP_008458599.1
DNA polymerase epsilon catalytic subunit A-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (2217 aa)
     
 
  0.925
XP_008451591.1
DNA mismatch repair protein PMS1 (921 aa)
   
 
  0.925
XP_008458258.1
DNA mismatch repair protein MSH7 (1094 aa)
   
 
0.925
XP_008451485.1
DNA mismatch repair protein MSH6; Component of the post-replicative DNA mismatch repair system (MMR) (1311 aa)
   
 
0.924
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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