STRINGSTRING
XP_008439216.1 protein (Cucumis melo) - STRING interaction network
"XP_008439216.1" - Transcription factor LAF1-like isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XP_008439216.1Transcription factor LAF1-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (262 aa)    
Predicted Functional Partners:
XP_008458987.1
E3 ubiquitin-protein ligase COP1-like (706 aa)
       
 
  0.693
XP_008456402.1
E3 ubiquitin-protein ligase COP1 isoform X1 (675 aa)
       
 
  0.693
XP_008466392.1
Transcription factor HY5 (157 aa)
       
 
  0.666
bZIP2
Uncharacterized protein LOC103488299; Transcription factor HY5-like (158 aa)
       
 
  0.666
XP_008442533.1
Uncharacterized protein LOC103486380 (251 aa)
       
 
  0.488
XP_008451731.1
B-box zinc finger protein 22; Probable salt tolerance-like protein At1g78600 (297 aa)
           
  0.420
XP_008464788.1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1153 aa)
           
  0.408
XP_008464786.1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1217 aa)
           
  0.408
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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