STRINGSTRING
XP_008439240.1 protein (Cucumis melo) - STRING interaction network
"XP_008439240.1" - Signal peptide peptidase-like 1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439240.1Signal peptide peptidase-like 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (369 aa)    
Predicted Functional Partners:
XP_008446044.1
Probable signal peptidase complex subunit 1 (93 aa)
     
   
  0.961
XP_008461195.1
LOW QUALITY PROTEIN- cell division cycle 5-like protein; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (1025 aa)
       
      0.728
XP_008453669.1
LOW QUALITY PROTEIN- cell division cycle 5-like protein; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (1018 aa)
       
      0.728
XP_008454178.1
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein); Belongs to the GTP-binding SRP family. SRP54 subfamily (495 aa)
     
   
  0.727
XP_008450004.1
Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins (194 aa)
     
   
  0.712
XP_008444821.1
Endoplasmin homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (817 aa)
     
        0.689
XP_008453882.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (286 aa)
     
 
  0.661
XP_008450797.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (242 aa)
     
 
  0.661
XP_008439975.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (244 aa)
     
 
  0.661
XP_008463606.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (691 aa)
     
        0.630
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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