STRINGSTRING
XP_008439247.1 protein (Cucumis melo) - STRING interaction network
"XP_008439247.1" - Cleavage and polyadenylation specificity factor subunit 2 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439247.1Cleavage and polyadenylation specificity factor subunit 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (738 aa)    
Predicted Functional Partners:
XP_008441850.1
Cleavage and polyadenylation specificity factor subunit 1 isoform X1 (1452 aa)
     
  0.999
XP_008459517.1
30-kDa cleavage and polyadenylation specificity factor 30-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (708 aa)
     
  0.999
XP_008445183.1
30-kDa cleavage and polyadenylation specificity factor 30; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (710 aa)
     
  0.999
XP_008465965.1
Flowering time control protein FY; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (732 aa)
     
  0.997
XP_008452744.1
Cleavage stimulation factor subunit 50 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (437 aa)
     
 
  0.995
XP_008465568.1
Cleavage and polyadenylation specificity factor subunit 3-I (617 aa)
     
0.995
XP_008442046.1
Cleavage stimulation factor subunit 3 (765 aa)
     
 
  0.993
XP_008465493.1
Cleavage and polyadenylation specificity factor subunit 3-I-like (84 aa)
     
 
  0.990
XP_008456694.1
Cleavage stimulating factor 64; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (527 aa)
     
 
  0.989
XP_008459148.1
Cleavage and polyadenylation specificity factor subunit 3-II; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (679 aa)
     
 
0.984
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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