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XP_008439254.1 protein (Cucumis melo) - STRING interaction network
"XP_008439254.1" - 60S ribosomal protein L36 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439254.160S ribosomal protein L36; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 83 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns; Belongs to the eukaryotic ribosomal protein eL36 family (110 aa)    
Predicted Functional Partners:
XP_008452010.1
40S ribosomal protein S10-1-like (182 aa)
     
 
  0.990
XP_008461845.1
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family (105 aa)
     
 
  0.989
XP_008461363.1
60S ribosomal protein L44 (105 aa)
     
 
  0.989
XP_008465194.1
40S ribosomal protein S15-4-like; Belongs to the universal ribosomal protein uS19 family (153 aa)
     
 
  0.989
XP_008438580.1
40S ribosomal protein S15-4; Belongs to the universal ribosomal protein uS19 family (153 aa)
     
 
  0.989
XP_008462725.1
40S ribosomal protein S24-1; Belongs to the eukaryotic ribosomal protein eS24 family (137 aa)
     
 
  0.989
XP_008455742.1
40S ribosomal protein S24; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 73 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns; Belongs to the eukaryotic ribosomal protein eS24 family (137 aa)
     
 
  0.989
XP_008463199.1
60S ribosomal protein L35a-1 (112 aa)
     
 
  0.989
XP_008442180.1
60S ribosomal protein L35a-1-like (112 aa)
     
 
  0.989
XP_008458454.1
40S ribosomal protein S21-2; Belongs to the eukaryotic ribosomal protein eS21 family (82 aa)
     
 
  0.989
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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