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XP_008439268.1 protein (Cucumis melo) - STRING interaction network
"XP_008439268.1" - Uncharacterized protein LOC103484098 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439268.1Uncharacterized protein LOC103484098; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (497 aa)    
Predicted Functional Partners:
XP_008437297.1
LOW QUALITY PROTEIN- puromycin-sensitive aminopeptidase; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- substituted 1 base at 1 genomic stop codon (986 aa)
           
  0.698
XP_008437290.1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (779 aa)
           
  0.652
XP_008454303.1
Uncharacterized protein LOC103494742 (154 aa)
           
  0.614
XP_008451518.1
Uncharacterized protein LOC103492779 (154 aa)
           
  0.614
XP_008450936.1
Subtilisin-like protease SBT1.8; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (765 aa)
           
  0.608
XP_008451621.1
Peptide chain release factor 1-like, mitochondrial (416 aa)
           
  0.596
XP_008460410.1
Protein MOS2 (530 aa)
           
  0.583
XP_008451050.1
Uncharacterized protein LOC103492453 (335 aa)
           
  0.582
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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