STRINGSTRING
XP_008439271.1 protein (Cucumis melo) - STRING interaction network
"XP_008439271.1" - BAHD acyltransferase DCR in Cucumis melo
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439271.1BAHD acyltransferase DCR (455 aa)    
Predicted Functional Partners:
XP_008437448.1
Protein BRANCHLESS TRICHOME (375 aa)
           
  0.711
XP_008441763.1
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (386 aa)
           
  0.699
XP_008442452.1
Glycerol-3-phosphate 2-O-acyltransferase 6 (504 aa)
     
   
  0.631
XP_008439001.1
LOW QUALITY PROTEIN- uncharacterized protein LOC103483927; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (331 aa)
           
  0.602
XP_008445960.1
Protein translocase subunit SecA; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; Belongs to the SecA family (1025 aa)
           
  0.597
XP_008448438.1
Diacylglycerol O-acyltransferase 2 (335 aa)
           
  0.591
XP_008458225.1
Probable glycerol-3-phosphate acyltransferase 8 (501 aa)
           
  0.584
XP_008448952.1
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (465 aa)
           
  0.566
XP_008447467.1
Long chain acyl-CoA synthetase 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (677 aa)
     
   
  0.561
XP_008446598.1
3-ketoacyl-CoA synthase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (496 aa)
     
   
  0.529
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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