STRINGSTRING
XP_008439275.1 protein (Cucumis melo) - STRING interaction network
"XP_008439275.1" - Uncharacterized protein LOC103484107 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439275.1Uncharacterized protein LOC103484107; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments (168 aa)    
Predicted Functional Partners:
XP_008458302.1
Multiprotein-bridging factor 1c (212 aa)
           
  0.485
XP_008458021.1
Uncharacterized protein LOC103497564 (284 aa)
           
  0.485
XP_008453528.1
Uncharacterized protein LOC103494211; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (248 aa)
           
  0.485
XP_008448981.1
Plant UBX domain-containing protein 8; Uncharacterized protein LOC103490991 (593 aa)
           
  0.485
XP_008442391.1
dnaJ protein ERDJ3A; Uncharacterized protein LOC103486271 (573 aa)
           
  0.485
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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