STRINGSTRING
XP_008439282.1 protein (Cucumis melo) - STRING interaction network
"XP_008439282.1" - Heat shock protein 83 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439282.1Heat shock protein 83; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 7 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (703 aa)    
Predicted Functional Partners:
XP_008444455.1
Heat stress transcription factor A-2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (367 aa)
     
 
  0.985
XP_008456139.1
Ankyrin-1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (458 aa)
   
 
  0.973
XP_008439299.1
Protein SGT1 homolog (357 aa)
     
 
  0.962
XP_008448895.1
hsp70-Hsp90 organizing protein 3-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (577 aa)
   
 
  0.947
XP_008464666.1
Heat shock 70 kDa protein 17 (898 aa)
     
 
  0.945
XP_008443651.1
Uncharacterized protein LOC103487198 (201 aa)
     
 
  0.937
XP_008443031.1
Activator of 90 kDa heat shock protein ATPase homolog 1 (352 aa)
     
 
  0.937
XP_008449324.1
Stress-induced-phosphoprotein 1; E3 ubiquitin-protein ligase CHIP (331 aa)
   
 
  0.928
XP_008459216.1
Peptidyl-prolyl cis-trans isomerase CYP40 (361 aa)
     
 
  0.916
XP_008454915.1
Peptidyl-prolyl cis-trans isomerase CYP40-like isoform X1 (361 aa)
     
 
  0.916
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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