STRINGSTRING
XP_008439283.1 protein (Cucumis melo) - STRING interaction network
"XP_008439283.1" - Glutaminyl-peptide cyclotransferase in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439283.1Glutaminyl-peptide cyclotransferase (324 aa)    
Predicted Functional Partners:
XP_008443951.1
CCR4-NOT transcription complex subunit 10; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (853 aa)
     
 
  0.888
XP_008438700.1
Putative methyltransferase C9orf114; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (368 aa)
           
  0.855
XP_008437770.1
Phospholipase A(1) DAD1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (417 aa)
           
  0.846
XP_008443510.1
Uncharacterized protein LOC103487079 (188 aa)
     
 
  0.804
XP_008437787.1
CCR4-NOT transcription complex subunit 1 (2381 aa)
     
 
  0.804
XP_008463258.1
Serine/threonine-protein kinase PBS1; Belongs to the protein kinase superfamily (400 aa)
           
  0.728
XP_008465868.1
Phospholipase A1-Ibeta2, chloroplastic (541 aa)
           
  0.724
XP_008464934.1
GDSL esterase/lipase At5g14450-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns; Belongs to the ’GDSL’ lipolytic enzyme family (377 aa)
           
  0.724
XP_008465329.1
General negative regulator of transcription subunit 3 (904 aa)
       
 
  0.718
XP_008449390.1
Phospholipase A1-IIgamma (479 aa)
           
  0.705
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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