STRINGSTRING
XP_008439289.1 protein (Cucumis melo) - STRING interaction network
"XP_008439289.1" - Probable receptor-like protein kinase At5g24010 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439289.1Probable receptor-like protein kinase At5g24010 (827 aa)    
Predicted Functional Partners:
XP_008457680.1
Actin-depolymerizing factor 5-like; Belongs to the actin-binding proteins ADF family (143 aa)
       
 
  0.672
XP_008457904.1
Uncharacterized GTP-binding protein At5g64813 isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments (337 aa)
           
  0.658
XP_008452482.1
Uncharacterized protein LOC103493502; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 16 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns (184 aa)
           
  0.576
2C05
Uncharacterized protein 2C05 isoform X1; Uncharacterized protein LOC103493341 (184 aa)
           
  0.576
XP_008453209.1
Cyclic dof factor 3 (469 aa)
           
  0.574
XP_008443398.1
Cyclic dof factor 2 (514 aa)
           
  0.574
XP_008443297.1
Cyclic dof factor 3-like (504 aa)
           
  0.574
XP_008442918.1
Cyclic dof factor 3-like (438 aa)
           
  0.574
XP_008463907.1
Tetraspanin-3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns; Belongs to the tetraspanin (TM4SF) family (287 aa)
           
  0.516
XP_008463449.1
Tetraspanin-3-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (285 aa)
           
  0.516
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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