STRINGSTRING
XP_008439295.1 protein (Cucumis melo) - STRING interaction network
"XP_008439295.1" - Mediator of RNA polymerase II transcription subunit 36a-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439295.1Mediator of RNA polymerase II transcription subunit 36a-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (306 aa)    
Predicted Functional Partners:
XP_008464470.1
Nucleolar protein 56-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (552 aa)
     
 
  0.993
XP_008455669.1
Probable nucleolar protein 5-2 (554 aa)
     
 
  0.993
XP_008459515.1
U3 snoRNP-associated protein-like YAO; U3 small nucleolar RNA-interacting protein 2-like (504 aa)
     
 
  0.992
XP_008464444.1
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA (551 aa)
     
 
  0.992
XP_008454272.1
Periodic tryptophan protein 2 homolog (892 aa)
     
 
  0.991
XP_008445600.1
Transducin beta-like protein 3 (871 aa)
     
 
  0.990
XP_008465711.1
U3 small nucleolar ribonucleoprotein protein IMP4 (293 aa)
     
 
  0.990
XP_008450686.1
WD repeat-containing protein 36; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (891 aa)
     
 
  0.990
XP_008451418.1
Protein SLOW WALKER 1; U3 small nucleolar RNA-associated protein 15 homolog (528 aa)
     
 
  0.990
XP_008459771.1
Nucleolar protein 6 isoform X1 (1059 aa)
     
 
  0.990
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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