STRINGSTRING
XP_008439298.1 protein (Cucumis melo) - STRING interaction network
"XP_008439298.1" - ABC transporter G family member 8 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439298.1ABC transporter G family member 8; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (611 aa)    
Predicted Functional Partners:
XP_008443435.1
Thioredoxin H2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 113 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns (172 aa)
           
  0.628
XP_008442384.1
UPF0098 protein TC_0109; Uncharacterized protein LOC103486265 (167 aa)
           
  0.621
XP_008462909.1
LOW QUALITY PROTEIN- protein DOWNY MILDEW RESISTANCE 6-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; Belongs to the iron/ascorbate-dependent oxidoreductase family (338 aa)
           
  0.567
XP_008452109.1
Dehydrin DHN1; Belongs to the plant dehydrin family (177 aa)
           
  0.567
XP_008455616.1
ABC transporter D family member 1 (1326 aa)
     
   
  0.560
XP_008445656.1
Protein NRT1/ PTR FAMILY 3.1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (584 aa)
       
 
  0.487
XP_008463375.1
Probable sulfate transporter 3.5 (648 aa)
         
  0.486
XP_008445767.1
Patellin-4 (496 aa)
       
 
  0.486
XP_008456121.1
Ferredoxin--nitrite reductase, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 13 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (583 aa)
         
  0.486
XP_008454052.1
Uncharacterized protein LOC103494591; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (785 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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