STRINGSTRING
XP_008439320.1 protein (Cucumis melo) - STRING interaction network
"XP_008439320.1" - ABC transporter C family member 10 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439320.1ABC transporter C family member 10 (1479 aa)    
Predicted Functional Partners:
XP_008453186.1
ABC transporter A family member 2 isoform X1 (974 aa)
     
 
  0.724
XP_008448256.1
Probable aminotransferase TAT2 (422 aa)
     
   
  0.702
XP_008460959.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (528 aa)
   
   
  0.651
XP_008456269.1
ABC transporter D family member 2, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (774 aa)
       
 
  0.627
XP_008440339.1
Peamaclein-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (94 aa)
           
  0.608
XP_008461708.1
Probable methyltransferase PMT11 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (678 aa)
           
  0.607
XP_008441393.1
Probable methyltransferase PMT11 (676 aa)
           
  0.607
XP_008462747.1
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1171 aa)
           
  0.551
XP_008457112.1
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (401 aa)
           
  0.551
XP_008465356.1
ABC transporter F family member 1 (698 aa)
     
   
  0.549
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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