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XP_008439326.1 protein (Cucumis melo) - STRING interaction network
"XP_008439326.1" - Ubiquitin-conjugating enzyme E2 10 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
XP_008439326.1Ubiquitin-conjugating enzyme E2 10; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 56 ESTs, 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns; Belongs to the ubiquitin-conjugating enzyme family (148 aa)    
Predicted Functional Partners:
XP_008449651.1
E3 ubiquitin-protein ligase KEG-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (1621 aa)
       
 
  0.863
XP_008446971.1
E3 ubiquitin-protein ligase KEG; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (1629 aa)
       
 
  0.863
XP_008457685.1
E3 ubiquitin-protein ligase UPL3 (1892 aa)
     
 
  0.848
XP_008442639.1
E3 ubiquitin-protein ligase UPL4; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (1515 aa)
     
 
  0.848
XP_008465272.1
Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family (1096 aa)
     
 
  0.838
XP_008446192.1
ubiquitin-40S ribosomal protein S27a (156 aa)
       
 
  0.818
XP_008440072.1
E3 ubiquitin-protein ligase UPL5 (925 aa)
       
 
  0.809
XP_008461919.1
Anaphase-promoting complex subunit 11 (84 aa)
       
 
  0.796
XP_008460450.1
E3 ubiquitin-protein ligase CHIP (274 aa)
       
 
  0.790
XP_008443369.1
Probable ubiquitin conjugation factor E4; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (1043 aa)
     
 
  0.778
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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