STRINGSTRING
XP_008439328.1 protein (Cucumis melo) - STRING interaction network
"XP_008439328.1" - Plastid division protein PDV1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
XP_008439328.1Plastid division protein PDV1 (310 aa)    
Predicted Functional Partners:
XP_008455264.1
Dynamin-like protein ARC5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (771 aa)
       
 
  0.990
XP_008444775.1
Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic (789 aa)
           
  0.969
XP_008449114.1
Cell division protein FtsZ homolog 1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (425 aa)
           
  0.941
XP_008463100.1
Plastid division protein CDP1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (844 aa)
           
  0.936
XP_008466740.1
Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X1 (784 aa)
     
   
  0.933
XP_008453007.1
Protein MULTIPLE CHLOROPLAST DIVISION SITE 1; Uncharacterized protein LOC103493840 isoform X1 (364 aa)
           
  0.855
XP_008462572.1
Cell division protein FtsZ homolog 2-2, chloroplastic-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (479 aa)
           
  0.848
XP_008454878.1
Plastid division protein PDV2 (337 aa)
       
 
0.817
XP_008465883.1
Uncharacterized protein LOC103503467 isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (310 aa)
           
  0.710
XP_008455128.1
Dynamin-related protein 3A-like isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (812 aa)
       
 
  0.673
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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